ProteoSep - ProteomeLab PF2D bibliography

Differential proteomics identifies PDIA3 as a novel chemoprevention target in human colon cancer cells.

Ménoret A, Drew DA, Miyamoto S, Nakanishi M, Vella AT, Rosenberg DW.

Mol Carcinog. 2014 Feb;53 Suppl 1:E11-22

Serum differential protein identification of Xinjiang Kazakh esophageal cancer patients based on the two-dimensional liquid-phase chromatography and LTQ MS.

Li C, Xia G, Jianqing Z, Mei Y, Ge B, Li Z.

Mol Biol Rep. 2014 Jan 28

Unveiling the rat urinary proteome with three complementary proteomics approaches.

Sánchez-Juanes F, Muñiz MC, Raposo C, Rodríguez-Prieto S, Paradela A, Quiros Y, López-Hernández F, González-Buitrago JM, Ferreira L.

Electrophoresis. 2013 Sep;34(17):2473-83

Proteomic identification of angiomotin by ProteomeLab PF-2D and correlation with clinical outcome in human clear cell renal cell carcinoma.

Yang J, Liu P, Tian M, Li Y, Chen W, Li X.

Int J Oncol. 2013 Jun;42(6):2078-86

Proteins implicated in the increase of adhesivity induced by suberoylanilide hydroxamic acid in leukemic cells.

Grebeňová D, Röselová P, Pluskalová M, Halada P, Rösel D, Suttnar J, Brodská B, Otevřelová P, Kuželová K.

J Proteomics. 2012 Dec 21;77:406-22

Possible novel roles of poly(rC)-binding protein 1 in SH-SY5Y neurocytes: an analysis using a dynamic Bayesian network.

Huo LR, Liang JT, Zou JH, Wang LY, Li Q, Wang XM.

Neurosci Bull. 2012 Jun;28(3):282-90

Application of the ProteomeLab™ PF2D protein fractionation system in proteomic analysis for human genetic diseases

Li Wang and Nanbert Zhong

Central European Journal of Chemistry, June 2012, Volume 10, Number 3, Pages 836-843

Immunoproteomics Identification of Major IgE and IgG4 Reactive Schistosoma japonicum Adult Worm Antigens Using Chronically Infected Human Plasma
D Boamah, M Kikuchi, NT Huy, K Okamoto, H Chen, I Ayi, DA Boakye, ...
Trop Med Health. Sep 2012; 40(3): 89–102

Serum proteomic signature of human chagasic patients for the identification of novel protein biomarkers of disease.

Wen JJ, Zago MP, Nunez S, Gupta S, Nunez Burgos F, Garg NJ.

Mol Cell Proteomics. 2012 Aug;11(8):435-52. Epub 2012 Apr 27

Cytochrome b5 and cytokeratin 17 are biomarkers in bronchoalveolar fluid signifying onset of acute lung injury.

Ménoret A, Kumar S, Vella AT.

PLoS One. 2012;7(7):e40184. Epub 2012 Jul 6.

Native antigen fractionation protein microarrays for biomarker discovery.

Caiazzo RJ Jr, O'Rourke DJ, Barder TJ, Nelson BP, Liu BC.

Methods Mol Biol. 2011;723:129-48

Differential liver proteome mapping of control and cadmium-fed rats.

Hispard F, de Vaufleury A, Schaeffer C, Scheifler R, Badot PM, Richert L, Martin H.

Ecotoxicol Environ Saf. 2011 May;74(4):576-83

Proteomic identification of a novel toxin protein (Txp40) from Xenorhabdus nematophila and its insecticidal activity against larvae of Plutella xylostella.

Park JM, Kim M, Min J, Lee SM, Shin KS, Oh SD, Oh SJ, Kim YH.

J Agric Food Chem. 2012 Apr 25;60(16):4053-9

A proteomic study of Hutchinson-Gilford progeria syndrome: Application of 2D-chromotography in a premature aging disease.

Wang L, Yang W, Ju W, Wang P, Zhao X, Jenkins EC, Brown WT, Zhong N.
Biochem Biophys Res Commun. 2012 Jan 27;417(4):1119-26

ATP synthase ecto-α-subunit: a novel therapeutic target for breast cancer.

Pan J, Sun LC, Tao YF, Zhou Z, Du XL, Peng L, Feng X, Wang J, Li YP, Liu L, Wu SY, Zhang YL, Hu SY, Zhao WL, Zhu XM, Lou GL, Ni J.

J Transl Med. 2011 Dec 8;9:211

The utilization of Triton X-100 for enhanced two-dimensional liquid-phase proteomics.

Kim M, Lee SH, Min J, Kobayashi F, Um HJ, Kim YH.

J Biomed Biotechnol. 2011;2011:213643

A two-dimensional protein fragmentation-proteomic study of neuronal ceroid lipofuscinoses: identification and characterization of differentially expressed proteins.

Wang P, Ju W, Wu D, Wang L, Yan M, Zou J, He B, Jenkins EC, Brown WT, Zhong N.

J Chromatogr B Analyt Technol Biomed Life Sci. 2011 Feb 15;879(5-6):304-16.

Proteomic mapping of bezafibrate-treated human hepatocytes in primary culture using two-dimensional liquid chromatography.

Alvergnas M, Rouleau A, Lucchi G, Heyd B, Ducoroy P, Richert L, Martin H.

Toxicol Lett. 2011 Mar 5;201(2):123-9.

Multiple forms of PKR present in the nuclei of acute leukemia cells represent an active kinase that is responsive to stress.

Blalock WL, Bavelloni A, Piazzi M, Tagliavini F, Faenza I, Martelli AM, Follo MY, Cocco L.

Leukemia. 2011 Feb;25(2):236-45.

A preliminary study on screening for Porphyromonas gingivalis outer membrane protein antigen with two-dimensional liquid phase fractionation and matrix-assisted laser desorption ionization time-of-flight/time-of-flight mass spectrometry.

Li A, Si WH, Wang SC, Shi JF, Rao GZ, Gou JZ.

Zhonghua Kou Qiang Yi Xue Za Zhi. 2010 Dec;45(12):749-53. Chinese.

Proteomic analysis of wheat embryos with 2-DE and liquid-phase chromatography (ProteomeLab PF-2D)--a wider perspective of the proteome.

Irar S, Brini F, Goday A, Masmoudi K, Pagès M.

J Proteomics. 2010 Aug 5;73(9):1707-21

Rapid T cell-based identification of human tumor tissue antigens by automated two-dimensional protein fractionation.

Beckhove P, Warta R, Lemke B, Stoycheva D, Momburg F, Schnölzer M, Warnken U, Schmitz-Winnenthal H, Ahmadi R, Dyckhoff G, Bucur M, Jünger S, Schueler T, Lennerz V, Woelfel T, Unterberg A, Herold-Mende C.

J Clin Invest. 2010 Jun 1;120(6):2230-42.

The identification of auto-antibodies in pancreatic cancer patient sera using a naturally fractionated Panc-1 cell line.

Li C, Kim HY, Vuong H, Patwa T, Pal M, Brand RE, Simeone DM, Lubman DM.

Cancer Biomark. 2010 Jan 1;7(1):25-37.

The oxazolidinone derivative locostatin induces cytokine appeasement.

Ménoret A, McAleer JP, Ngoi SM, Ray S, Eddy NA, Fenteany G, Lee SJ, Rossi RJ, Mukherji B, Allen DL, Chakraborty NG, Vella AT.

J Immunol. 2009 Dec 1;183(11):7489-96.

Identification of differentially expressed spatial clusters using humoral response microarray data.

Wu J, Patwa TH, Lubman DM, Ghosh D.

Comput Stat Data Anal. 2009 Jun 15;53(8):3094-3102

The identification of phosphoglycerate kinase-1 and histone H4 autoantibodies in pancreatic cancer patient serum using a natural protein microarray.

Patwa TH, Li C, Poisson LM, Kim HY, Pal M, Ghosh D, Simeone DM, Lubman DM.

Electrophoresis. 2009 Jun;30(12):2215-26

All-liquid separations, protein microarrays, and mass spectrometry to interrogate serum proteomes: an application to serum glycoproteomics.

Patwa TH, Qiu Y, Zhao J, Simeone DM, Lubman DM.

Methods Mol Biol. 2009;520:75-87

Enrichment of glycoproteins using nanoscale chelating concanavalin A monolithic capillary chromatography.

Feng S, Yang N, Pennathur S, Goodison S, Lubman DM.

Anal Chem. 2009 May 15;81(10):3776-83

Comparative proteomic study of two closely related ovarian endometrioid adenocarcinoma cell lines using cIEF fractionation and pathway analysis.

Dai L, Li C, Shedden KA, Misek DE, Lubman DM.

Electrophoresis. 2009 Apr;30(7):1119-31

Analysis of protein glycosylation and phosphorylation using liquid phase separation, protein microarray technology, and mass spectrometry.

Zhao J, Patwa TH, Pal M, Qiu W, Lubman DM.

Methods Mol Biol. 2009;492:321-51

Multidimensional protein fractionation using ProteomeLab PF 2D for profiling amyotrophic lateral sclerosis immunity: A preliminary report.

Schlautman JD, Rozek W, Stetler R, Mosley RL, Gendelman HE, Ciborowski P.

Proteome Sci. 2008 Sep 12;6:26.

A novel phosphoprotein analysis scheme for assessing changes in premalignant and malignant breast cell lines using 2D liquid separations, protein microarrays and tandem mass spectrometry.

Patwa TH, Wang Y, Miller FR, Goodison S, Pennathur S, Barder TJ, Lubman DM.

Proteomics Clin Appl. 2008;3(1):51-66

[Two-dimensional liquid phase chromatographic proteome profiles in Uighur women with uterine cervix cancer]

Guo X, Abulizi A, Wu G, Liu K.

Zhong Nan Da Xue Xue Bao Yi Xue Ban. 2009 Jul;34(7):624-9. Chinese.

Proteome approach for identification of schistosomiasis japonica vaccine candidate antigen.

Abdel-Hafeez EH, Kikuchi M, Watanabe K, Ito T, Yu C, Chen H, Nara T, Arakawa T, Aoki Y, Hirayama K.

Parasitol Int. 2009 Mar;58(1):36-44.

Analysis of protein glycosylation and phosphorylation using liquid phase separation, protein microarray technology, and mass spectrometry.

Zhao J, Patwa TH, Pal M, Qiu W, Lubman DM.

Methods Mol Biol. 2009;492:321-51.

High-throughput liquid-liquid fractionation of multiple protein post-translational modifications.

Deford JH, Nuss JE, Amaning J, English RD, Tjernlund D, Papaconstantinou J.

J Proteome Res. 2009 Feb;8(2):907-16.

Identification of transcripts and translatants targeted by overexpressed PCBP1.

Huo LR, Zhong N.

Biochim Biophys Acta. 2008 Nov;1784(11):1524-33.

Multidimensional protein fractionation using ProteomeLab PF 2D for profiling amyotrophic lateral sclerosis immunity: A preliminary report.

Schlautman JD, Rozek W, Stetler R, Mosley RL, Gendelman HE, Ciborowski P.

Proteome Sci. 2008 Sep 12;6:26.

Application of a peptide-based PF2D platform for quantitative proteomics in disease biomarker discovery.

Lee HJ, Kang MJ, Lee EY, Cho SY, Kim H, Paik YK.

Proteomics. 2008 Aug;8(16):3371-81.

High reproducibility of two-dimensional liquid chromatography using pH-driven fractionation with a pressure-resistant electrode.

Suberbielle E, Gonzalez-Dunia D, Pont F.

J Chromatogr B Analyt Technol Biomed Life Sci. 2008 Aug 1;871(1):125-9.

Enhanced Detection of Autoantibodies on Protein Microarrays Using a Modified Protein Digestion Technique

Tasneem H. Patwa, Yanfei Wang, Diane M. Simeone, and David M. Lubman, J Proteome Res. 2008 June; 7(6): 2553–2561.

Establishment of a PF2D-MS/MS platform for rapid profiling and semiquantitative analysis of membrane protein biomarkers.

Lee HJ, Kwon MS, Lee EY, Cho SY, Paik YK.

Proteomics. 2008 Jun;8(11):2168-77.

Comparative proteomic analysis of radiation-induced changes in mouse lung: fibrosis-sensitive and -resistant strains.

Ao X, Lubman DM, Davis MA, Xing X, Kong FM, Lawrence TS, Zhang M.

Radiat Res. 2008 Apr;169(4):417-25.

Differential liquid phase proteomic analysis of the effect of selenium supplementation in LNCaP cells.

Roveri A, Vitale MP, Serain E, Zaccarin M, Mauri P, Di Silvestre D, De Palma A, Gion M, Toppo S, Maiorino M, Ursini F.

J Chromatogr B Analyt Technol Biomed Life Sci. 2008 Apr 1;865(1-2):63-73.

Plasma glycoprotein profiling for colorectal cancer biomarker identification by lectin glycoarray and lectin blot.

Qiu Y, Patwa TH, Xu L, Shedden K, Misek DE, Tuck M, Jin G, Ruffin MT, Turgeon DK, Synal S, Bresalier R, Marcon N, Brenner DE, Lubman DM.

J Proteome Res. 2008 Apr;7(4):1693-703.

Micro-proteome analysis using micro-chromatofocusing in intact protein separations.

Kim H, Lubman DM.

J Chromatogr A. 2008 Jun 13;1194(1):3-10.

Humoral response profiling reveals pathways to prostate cancer progression.

Taylor BS, Pal M, Yu J, Laxman B, Kalyana-Sundaram S, Zhao R, Menon A, Wei JT, Nesvizhskii AI, Ghosh D, Omenn GS, Lubman DM, Chinnaiyan AM, Sreekumar A.

Mol Cell Proteomics. 2008 Mar;7(3):600-11.

Utilizing endoscopic technology to reveal real-time proteomic alterations in response to chemoprevention.

Nakanishi M, Ménoret A, Belinsky GS, Giardina C, Godman CA, Vella AT, Rosenberg DW.

Proteomics Clin Appl. 2007 Dec;1(12):1660-6.

Differential expression of acidic proteins with progression in the MCF10 model of human breast disease.

Buchanan NS, Zhao J, Zhu K, Patwa TH, Miller FR, Lubman DM.

Int J Oncol. 2007 Oct;31(4):941-9.

A comparison of 2-D chromatography separations using UV and (18)O quantification of proteins in similar proteomes.

Smith JR, Matus I, Greene AS.

J Sep Sci. 2008 Feb;31(2):314-20.

Relative quantitation of proteins fractionated by the ProteomeLab PF 2D system using isobaric tags for relative and absolute quantitation (iTRAQ).

Skalnikova H, Rehulka P, Chmelik J, Martinkova J, Zilvarova M, Gadher SJ, Kovarova H.

Anal Bioanal Chem. 2007 Nov;389(5):1639-45.

Differential expression of ribosomal proteins in a human metastasis model identified by coupling 2-D liquid chromatography and mass spectrometry.

Kreunin P, Yoo C, Urquidi V, Lubman DM, Goodison S.

Cancer Genomics Proteomics. 2007 Sep-Oct;4(5):329-39.

Characterization of apolipoprotein and apolipoprotein precursors in pancreatic cancer serum samples via two-dimensional liquid chromatography and mass spectrometry.

Chen J, Anderson M, Misek DE, Simeone DM, Lubman DM.

J Chromatogr A. 2007 Aug 31;1162(2):117-25.

Identification and quantification of basic and acidic proteins using solution-based two-dimensional protein fractionation and label-free or 18O-labeling mass spectrometry.

Wu WW, Wang G, Yu MJ, Knepper MA, Shen RF.

J Proteome Res. 2007 Jul;6(7):2447-59.

[The application of two-dimensional liquid phase chromatography to separation of total protein of Leymus chinensis shoot]

Xie LN, Nie YZ, Zhang XL, Chen TX, Liu JH, Jiang Y, Li YH.

Zhi Wu Sheng Li Yu Fen Zi Sheng Wu Xue Xue Bao. 2007 Jun;33(3):258-66. Chinese.

Comparative proteomics analysis of Barrett metaplasia and esophageal adenocarcinoma using two-dimensional liquid mass mapping.

Zhao J, Chang AC, Li C, Shedden KA, Thomas DG, Misek DE, Manoharan AP, Giordano TJ, Beer DG, Lubman DM.

Mol Cell Proteomics. 2007 Jun;6(6):987-99.

An immuno-PF2D-MS/MS proteomic approach for bacterial antigenic characterization: to Bacillus and beyond.

Ruelle V, Falisse-Poirrier N, Elmoualij B, Zorzi D, Pierard O, Heinen E, De Pauw E, Zorzi W.

J Proteome Res. 2007 Jun;6(6):2168-75

Comparative proteomic analysis of B. cenocepacia using two-dimensional liquid separations coupled with mass spectrometry.

Park KH, Lipuma JJ, Lubman DM.

Anal Chim Acta. 2007 May 29;592(1):91-100

A proteomic analysis of Psychrobacter articus 273-4 adaptation to low temperature and salinity using a 2-D liquid mapping approach.

Zheng S, Ponder MA, Shih JY, Tiedje JM, Thomashow MF, Lubman DM.

Electrophoresis. 2007 Feb;28(3):467-88.

Proteomic profiling identifies breast tumor metastasis-associated factors in an isogenic model.

Kreunin P, Yoo C, Urquidi V, Lubman DM, Goodison S.

Proteomics. 2007 Jan;7(2):299-312.

Schabacker DS, Stefanovska I, Gavin I, Pedrak C, Chandler DP.
Protein array staining methods for undefined protein content, manufacturing quality control, and performance validation.

Anal Biochem. 2006 Dec 1;359(1):84-93.

McDonald T, Sheng S, Stanley B, Chen D, Ko Y, Cole RN, Pedersen P, Van Eyk JE.
Expanding the subproteome of the inner mitochondria using protein separation technologies: one- and two-dimensional liquid chromatography and two-dimensional gel electrophoresis.
Mol Cell Proteomics. 2006 Dec;5(12):2392-411

Gunther NW 4th, Nunez A, Fortis L, Solaiman DK.

Proteomic based investigation of rhamnolipid production by Pseudomonas chlororaphis strain NRRL B-30761.

J Ind Microbiol Biotechnol. 2006 Nov;33(11):914-20

Classifications of ovarian cancer tissues by proteomic patterns.

Zhu Y, Wu R, Sangha N, Yoo C, Cho KR, Shedden KA, Katabuchi H, Lubman DM.

Proteomics. 2006 Nov;6(21):5846-56.

Proteomic analysis of cold adaptation in a Siberian permafrost bacterium--Exiguobacterium sibiricum 255-15 by two-dimensional liquid separation coupled with mass spectrometry.

Qiu Y, Kathariou S, Lubman DM.

Proteomics. 2006 Oct;6(19):5221-33.

Barre O, Solioz M.

Improved protocol for chromatofocusing on the ProteomeLab PF2D.
Proteomics. 2006 Oct;6(19):5096-8.

Chahal FC, Entwistle J, Glover N, Macdonald GC.

A targeted proteomic approach for the identification of tumor-associated membrane antigens using the ProteomeLab PF-2D in tandem with mass spectrometry.

Biochem Biophys Res Commun. 2006 Sep 29;348(3):1055-62.

Proteomic analysis of rat plasma by two-dimensional liquid chromatography and matrix-assisted laser desorption ionization time-of-flight mass spectrometry.

Linke T, Ross AC, Harrison EH.

J Chromatogr A. 2006 Aug 11;1123(2):160-9.

Proteomic analysis of estrogen response of premalignant human breast cells using a 2-D liquid separation/mass mapping technique.

Zhao J, Zhu K, Lubman DM, Miller FR, Shekhar MP, Gerard B, Barder TJ.

Proteomics. 2006 Jul;6(13):3847-61.

Multidimensional protein fractionation using ProteomeLab PF 2D™ for profiling amyotrophic lateral sclerosis immunity: A preliminary report

Joshua D Schlautman, Wojciech Rozek, Robert Stetler, R Lee Mosley, Howard E Gendelman, and Pawel Ciborowski Proteome Sci. 2008; 6 : 26.

Proteome-level display by 2-dimensional chromatography of extracellular matrix-dependent modulation of the phenotype of bladder cancer cells

Robert E Hurst, Kimberly D Kyker, Mikhail G Dozmorov, Nobuaki Takemori, Anil Singh, Hiroyuki Matsumoto, Ricardo Saban, Edna Betgovargez, and Michael H Simonian Proteome Sci. 2006; 4 : 13

Yamakoshi Y, Hu JC, Zhang H, Iwata T, Yamakoshi F, Simmer JP.
Proteomic analysis of enamel matrix using a two-dimensional protein fractionation system.
Eur J Oral Sci. 2006 May;114 Suppl 1:266-71; discussion 285-6, 382.

Ornstein DK, Tyson DR.
Proteomics for the identification of new prostate cancer biomarkers.
Urol Oncol. 2006 May-Jun;24(3):231-6. Review.

Pirondini A, Visioli G, Malcevschi A, Marmiroli N.

A 2-D liquid-phase chromatography for proteomic analysis in plant tissues.
J Chromatogr B Analyt Technol Biomed Life Sci. 2006 Mar 20;833(1):91-100.

Shin YK, Lee HJ, Lee JS, Paik YK.

Proteomic analysis of mammalian basic proteins by liquid-based two-dimensional column chromatography.

Proteomics. 2006 Feb;6(4):1143-50

Pal M, Moffa A, Sreekumar A, Ethier SP, Barder TJ, Chinnaiyan A, Lubman DM.

Differential phosphoprotein mapping in cancer cells using protein microarrays produced from 2-D liquid fractionation.
Anal Chem. 2006 Feb 1;78(3):702-10.

Sheng S, Chen D, Van Eyk JE.

Multidimensional liquid chromatography separation of intact proteins by chromatographic focusing and reversed phase of the human serum proteome: optimization and protein database.
Mol Cell Proteomics. 2006 Jan;5(1):26-34.

Billecke C, Malik I, Movsisyan A, Sulghani S, Sharif A, Mikkelsen T, Farrell NP, Bogler O.

Analysis of glioma cell platinum response by metacomparison of two-dimensional chromatographic Proteome profiles.
Mol Cell Proteomics. 2006 Jan;5(1):35-42.

Linke T, Ross AC, Harrison EH.

Proteomic analysis of rat plasma by two-dimensional liquid chromatography and matrix-assisted laser desorption ionization time-of-flight mass spectrometry.
J Chromatogr A. 2006 Jan 31.

Chen EI, Hewel J, Felding-Habermann B, Yates JR 3rd.

Large scale protein profiling by combination of protein fractionation and multidimensional protein identification technology (MudPIT).
Mol Cell Proteomics. 2006 Jan;5(1):53-6.

Soldi M, Sarto C, Valsecchi C, Magni F, Proserpio V, Ticozzi D, Mocarelli P.

Proteome profile of human urine with two-dimensional liquid phase fractionation.
Proteomics. 2005 Jul;5(10):2641-7.

Wang Y, Wu R, Cho KR, Shedden KA, Barder TJ, Lubman DM.

Classification of cancer cell lines using an automated two-dimensional liquid mapping method with hierarchical clustering techniques.
Mol Cell Proteomics. 2006 Jan;5(1):43-52.

Levreri I, Musante L, Petretto A, Bruschi M, Candiano G, Melioli G.

Separation of human serum proteins using the Beckman-Coulter PF2D system: analysis of ion exchange-based first dimension chromatography.
Clin Chem Lab Med. 2005;43(12):1327-33

Zhu K, Zhao J, Lubman DM, Miller FR, Barder TJ.

Protein pI shifts due to posttranslational modifications in the separation and characterization of proteins.
Anal Chem. 2005 May 1;77(9):2745-55.

Buchanan NS, Hamler RL, Leopold PE, Miller FR, Lubman DM.

Mass mapping of cancer cell lysates using two-dimensional liquid separations, electrospray-time of flight-mass spectrometry, and automated data processing.
Electrophoresis. 2005 Jan;26(1):248-56.

Zhua K, Kachman MT, Miller FR, Lubman DM, Zand R.

Use of two-dimensional liquid fractionation for separation of proteins from cell lysates without the presence of methionine oxidation.
J Chromatogr A. 2004 Oct 22;1053(1-2):133-42.

Kreunin P, Urquidi V, Lubman DM, Goodison S.

Identification of metastasis-associated proteins in a human tumor metastasis model using the mass-mapping technique.
Proteomics. 2004 Sep;4(9):2754-65.

Zhu K, Miller FR, Barder TJ, Lubman DM.

Identification of low molecular weight proteins isolated by 2-D liquid separations.
J Mass Spectrom. 2004 Jul;39(7):770-80.

Wang H, Kachman MT, Schwartz DR, Cho KR, Lubman DM.

Comprehensive proteome analysis of ovarian cancers using liquid phase separation, mass mapping and tandem mass spectrometry: a strategy for identification of candidate cancer biomarkers.
Proteomics. 2004 Aug;4(8):2476-95.

Zhu Y, Lubman DM.

Narrow-band fractionation of proteins from whole cell lysates using isoelectric membrane focusing and nonporous reversed-phase separations.
Electrophoresis. 2004 Apr;25(7-8):949-58.

Zhu K, Yan F, O'Neil KA, Hamler R, Lubman DM, Lin L, Barder TJ,

Proteomic analysis using 2-D liquid separations of intact proteins from whole-cell lysates.
Curr Protoc Protein Sci. 2004 Feb;Chapter 23:Unit 23.3.

Hamler RL, Zhu K, Buchanan NS, Kreunin P, Kachman MT, Miller FR, Lubman DM.

A two-dimensional liquid-phase separation method coupled with mass spectrometry for proteomic studies of breast cancer and biomarker identification.
Proteomics. 2004 Mar;4(3):562-77.

Zheng S, Schneider KA, Barder TJ, Lubman DM.

Two-dimensional liquid chromatography protein expression mapping for differential proteomic analysis of normal and O157:H7 Escherichia coli.
Biotechniques. 2003 Dec;35(6):1202-12.

Zhu K, Kim J, Yoo C, Miller FR, Lubman DM.

High sequence coverage of proteins isolated from liquid separations of breast cancer cells using capillary electrophoresis-time-of-flight MS and MALDI-TOF MS mapping.
Anal Chem. 2003 Nov 15;75(22):6209-17.

Yan F, Subramanian B, Nakeff A, Barder TJ, Parus SJ, Lubman DM.

A comparison of drug-treated and untreated HCT-116 human colon adenocarcinoma cellsusing a 2-D liquid separation mapping method based upon chromatofocusing PI fractionation.
Anal Chem. 2003 May 15;75(10):2299-308.

O'Neil KA, Miller FR, Barder TJ, Lubman DM.

Profiling the progression of cancer: separation of microsomal proteins in MCF10 breast epithelial cell lines using nonporous chromatophoresis.
Proteomics. 2003 Jul;3(7):1256-69.

Yan F, Sreekumar A, Laxman B, Chinnaiyan AM, Lubman DM, Barder TJ.

Protein microarrays using liquid phase fractionation of cell lysates.
Proteomics. 2003 Jul;3(7):1228-35.

Kim J, Zand R, Lubman DM.

Electrophoretic mobility for peptides with post-translational modifications in capillary electrophoresis. Electrophoresis. 2003 Mar;24(5):782-93.

Lubman DM, Kachman MT, Wang H, Gong S, Yan F, Hamler RL, O'Neil KA, Zhu K, Buchanan NS, Barder TJ.

Two-dimensional liquid separations-mass mapping of proteins from human cancer cell lysates.
J Chromatogr B Analyt Technol Biomed Life Sci. 2002 Dec 25;782(1-2):183-96. Review.

Wang H, Kachman MT, Schwartz DR, Cho KR, Lubman DM.

A protein molecular weight map of ES2 clear cell ovarian carcinoma cells using a two-dimensional liquid separations/mass mapping technique.
Electrophoresis. 2002 Sep;23(18):3168-81.

Wall DB, Parus SJ, Lubman DM.

Three-dimensional protein map according to pI, hydrophobicity and molecular mass.
J Chromatogr B Analyt Technol Biomed Life Sci. 2002 Jul 5;774(1):53-8.

Kachman MT, Wang H, Schwartz DR, Cho KR, Lubman DM.

A 2-D liquid separations/mass mapping method for interlysate comparison of ovarian cancers.
Anal Chem. 2002 Apr 15;74(8):1779-91.

Wall DB, Parus SJ, Lubman DM.

Comparison of the capabilities of liquid isoelectric focusing-one-dimensional nonporous silica reversed-phase liquid chromatography-electrospray ionization time-of-flight mass spectrometry and liquid isoelectric focusing-one-dimensional sodium dodecyl sulfate polyacrylamide gel electrophoresis mass mapping for the analysis of intact protein molecular masses.
J Chromatogr B Biomed Sci Appl. 2001 Nov 5;763(1-2):139-48.

Wall DB, Kachman MT, Gong SS, Parus SJ, Long MW, Lubman DM.

Isoelectric focusing nonporous silica reversed-phase high-performance liquid chromatography/electrospray ionization time-of-flight mass spectrometry: a three-dimensional liquid-phase protein separation method as applied to the human erythroleukemia cell-line.
Rapid Commun Mass Spectrom. 2001;15(18):1649-61.

Chong BE, Hamler RL, Lubman DM, Ethier SP, Rosenspire AJ, Miller FR.

Differential screening and mass mapping of proteins from premalignant and cancer cell lines using nonporous reversed-phase HPLC coupled with mass spectrometric analysis.
Anal Chem. 2001 Mar 15;73(6):1219-27.

Chong BE, Yan F, Lubman DM, Miller FR.

Chromatofocusing nonporous reversed-phase high-performance liquid chromatography/electrospray ionization time-of-flight mass spectrometry of proteins from human breast cancer whole cell lysates: a novel two-dimensional liquid chromatography/mass spectrometry method.
Rapid Commun Mass Spectrom. 2001;15(4):291-6.

Chong BE, Kim J, Lubman DM, Tiedje JM, Kathariou S.

Use of non-porous reversed-phase high-performance liquid chromatography for protein profiling and isolation of proteins induced by temperature variations for Siberian permafrost bacteria with identification by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry and capillary electrophoresis-electrospray ionization mass spectrometry.
J Chromatogr B Biomed Sci Appl. 2000 Oct 1;748(1):167-77.

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Wall DB, Kachman MT, Gong S, Hinderer R, Parus S, Misek DE, Hanash SM, Lubman DM.

Isoelectric focusing nonporous RP HPLC: a two-dimensional liquid-phase separation method for mapping of cellular proteins with identification using MALDI-TOF mass spectrometry.
Anal Chem. 2000 Mar 15;72(6):1099-111.

Chong BE, Lubman DM, Miller FR, Rosenspire AJ.

Rapid screening of protein profiles of human breast cancer cell lines using non-porous reversed-phase high performance liquid chromatography separation with matrix-assisted laser desorption/ionization time-of-flight mass spectral analysis.
Rapid Commun Mass Spectrom. 1999;13(18):1808-12.

Chen Y, Wall D, Lubman DM.

Rapid identification and screening of proteins from whole cell lysates of human erythroleukemia cells in the liquid phase, using non-porous reversed phase high-performance liquid chromatography separations of proteins followed by matrix-assisted [correction of multi-assisted] laser desorption/ionization mass spectrometry analysis and sequence database searching.
Rapid Commun Mass Spectrom. 1998;12(24):1994-2003.